Oomycetes baited from streams in Tennessee 2010-2012.
Identifieur interne : 001177 ( Main/Exploration ); précédent : 001176; suivant : 001178Oomycetes baited from streams in Tennessee 2010-2012.
Auteurs : Sandesh K. Shrestha [États-Unis] ; Yuxin Zhou ; Kurt LamourSource :
- Mycologia [ 0027-5514 ]
Descripteurs français
- KwdFr :
- MESH :
- génétique : Oomycetes.
- isolement et purification : Oomycetes.
- microbiologie : Rivières.
- Données de séquences moléculaires, Oomycetes, Phylogenèse, Tennessee.
English descriptors
- KwdEn :
- MESH :
Abstract
Sixteen streams in middle and eastern Tennessee were surveyed for the sudden oak-death pathogen Phytophthora ramorum 2010-2012. Surveys were conducted in the spring and fall using healthy Rhododendron leaves, and a total of 354 oomycete isolates were recovered. Sequence analysis of the ITS region provisionally identified 151 Phytophthora, 200 Pythium, two Halophytophthora and one Phytopythium. These include six Phytophthora species (P. cryptogea, P. hydropathica, P. irrigata, P. gonapodyides, P. lacustris, P. polonica), members of the P. citricola species complex, five unknown Phytophthora species, 11 Pythium species (P. helicoides, P. diclinum, P. litorale, P. senticosum, P. undulatum, P. vexans, P. citrinum, P. apleroticum, P. chamaihyphon, P. montanum, P. pyrilobum), three unknown Pythium species, Halophytophthora batemanensis, and one Phytopythium isolate. The biology and implications are discussed.
DOI: 10.3852/13-010
PubMed: 23921241
Affiliations:
Links toward previous steps (curation, corpus...)
Le document en format XML
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Shrestha</name><affiliation wicri:level="2"><nlm:affiliation>Department of Entomology and Plant Pathology, University of Tennessee, Knoxville, Tennessee 37996.</nlm:affiliation><country xml:lang="fr">États-Unis</country><placeName><region type="state">Tennessee</region></placeName><wicri:cityArea>Department of Entomology and Plant Pathology, University of Tennessee, Knoxville</wicri:cityArea></affiliation></author><author><name sortKey="Zhou, Yuxin" sort="Zhou, Yuxin" uniqKey="Zhou Y" first="Yuxin" last="Zhou">Yuxin Zhou</name></author><author><name sortKey="Lamour, Kurt" sort="Lamour, Kurt" uniqKey="Lamour K" first="Kurt" last="Lamour">Kurt Lamour</name></author></titleStmt><publicationStmt><idno type="wicri:source">PubMed</idno><date when="2013">2013 Nov-Dec</date><idno type="RBID">pubmed:23921241</idno><idno type="pmid">23921241</idno><idno type="doi">10.3852/13-010</idno><idno type="wicri:Area/Main/Corpus">001239</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Corpus" wicri:corpus="PubMed">001239</idno><idno type="wicri:Area/Main/Curation">001239</idno><idno type="wicri:explorRef" wicri:stream="Main" wicri:step="Curation">001239</idno><idno type="wicri:Area/Main/Exploration">001239</idno></publicationStmt><sourceDesc><biblStruct><analytic><title xml:lang="en">Oomycetes baited from streams in Tennessee 2010-2012.</title><author><name sortKey="Shrestha, Sandesh K" sort="Shrestha, Sandesh K" uniqKey="Shrestha S" first="Sandesh K" last="Shrestha">Sandesh K. 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Surveys were conducted in the spring and fall using healthy Rhododendron leaves, and a total of 354 oomycete isolates were recovered. Sequence analysis of the ITS region provisionally identified 151 Phytophthora, 200 Pythium, two Halophytophthora and one Phytopythium. These include six Phytophthora species (P. cryptogea, P. hydropathica, P. irrigata, P. gonapodyides, P. lacustris, P. polonica), members of the P. citricola species complex, five unknown Phytophthora species, 11 Pythium species (P. helicoides, P. diclinum, P. litorale, P. senticosum, P. undulatum, P. vexans, P. citrinum, P. apleroticum, P. chamaihyphon, P. montanum, P. pyrilobum), three unknown Pythium species, Halophytophthora batemanensis, and one Phytopythium isolate. The biology and implications are discussed.</div></front></TEI><pubmed><MedlineCitation Status="MEDLINE" Owner="NLM"><PMID Version="1">23921241</PMID><DateCompleted><Year>2014</Year><Month>01</Month><Day>16</Day></DateCompleted><DateRevised><Year>2013</Year><Month>12</Month><Day>06</Day></DateRevised><Article PubModel="Print-Electronic"><Journal><ISSN IssnType="Print">0027-5514</ISSN><JournalIssue CitedMedium="Print"><Volume>105</Volume><Issue>6</Issue><PubDate><MedlineDate>2013 Nov-Dec</MedlineDate></PubDate></JournalIssue><Title>Mycologia</Title><ISOAbbreviation>Mycologia</ISOAbbreviation></Journal><ArticleTitle>Oomycetes baited from streams in Tennessee 2010-2012.</ArticleTitle><Pagination><MedlinePgn>1516-23</MedlinePgn></Pagination><ELocationID EIdType="doi" ValidYN="Y">10.3852/13-010</ELocationID><Abstract><AbstractText>Sixteen streams in middle and eastern Tennessee were surveyed for the sudden oak-death pathogen Phytophthora ramorum 2010-2012. Surveys were conducted in the spring and fall using healthy Rhododendron leaves, and a total of 354 oomycete isolates were recovered. Sequence analysis of the ITS region provisionally identified 151 Phytophthora, 200 Pythium, two Halophytophthora and one Phytopythium. These include six Phytophthora species (P. cryptogea, P. hydropathica, P. irrigata, P. gonapodyides, P. lacustris, P. polonica), members of the P. citricola species complex, five unknown Phytophthora species, 11 Pythium species (P. helicoides, P. diclinum, P. litorale, P. senticosum, P. undulatum, P. vexans, P. citrinum, P. apleroticum, P. chamaihyphon, P. montanum, P. pyrilobum), three unknown Pythium species, Halophytophthora batemanensis, and one Phytopythium isolate. The biology and implications are discussed.</AbstractText></Abstract><AuthorList CompleteYN="Y"><Author ValidYN="Y"><LastName>Shrestha</LastName><ForeName>Sandesh K</ForeName><Initials>SK</Initials><AffiliationInfo><Affiliation>Department of Entomology and Plant Pathology, University of Tennessee, Knoxville, Tennessee 37996.</Affiliation></AffiliationInfo></Author><Author ValidYN="Y"><LastName>Zhou</LastName><ForeName>Yuxin</ForeName><Initials>Y</Initials></Author><Author ValidYN="Y"><LastName>Lamour</LastName><ForeName>Kurt</ForeName><Initials>K</Initials></Author></AuthorList><Language>eng</Language><PublicationTypeList><PublicationType UI="D016428">Journal Article</PublicationType></PublicationTypeList><ArticleDate DateType="Electronic"><Year>2013</Year><Month>08</Month><Day>06</Day></ArticleDate></Article><MedlineJournalInfo><Country>England</Country><MedlineTA>Mycologia</MedlineTA><NlmUniqueID>0400764</NlmUniqueID><ISSNLinking>0027-5514</ISSNLinking></MedlineJournalInfo><CitationSubset>IM</CitationSubset><MeshHeadingList><MeshHeading><DescriptorName UI="D008969" MajorTopicYN="N">Molecular Sequence Data</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D009868" MajorTopicYN="N">Oomycetes</DescriptorName><QualifierName UI="Q000145" MajorTopicYN="N">classification</QualifierName><QualifierName UI="Q000235" MajorTopicYN="N">genetics</QualifierName><QualifierName UI="Q000302" MajorTopicYN="Y">isolation & purification</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D010802" MajorTopicYN="N">Phylogeny</DescriptorName></MeshHeading><MeshHeading><DescriptorName UI="D045483" MajorTopicYN="N">Rivers</DescriptorName><QualifierName UI="Q000382" MajorTopicYN="Y">microbiology</QualifierName></MeshHeading><MeshHeading><DescriptorName UI="D013714" MajorTopicYN="N" Type="Geographic">Tennessee</DescriptorName></MeshHeading></MeshHeadingList><KeywordList Owner="NOTNLM"><Keyword MajorTopicYN="N">Oomycetes</Keyword><Keyword MajorTopicYN="N">environmental samples</Keyword><Keyword MajorTopicYN="N">species diversity</Keyword></KeywordList></MedlineCitation><PubmedData><History><PubMedPubDate PubStatus="entrez"><Year>2013</Year><Month>8</Month><Day>8</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="pubmed"><Year>2013</Year><Month>8</Month><Day>8</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate><PubMedPubDate PubStatus="medline"><Year>2014</Year><Month>1</Month><Day>17</Day><Hour>6</Hour><Minute>0</Minute></PubMedPubDate></History><PublicationStatus>ppublish</PublicationStatus><ArticleIdList><ArticleId IdType="pubmed">23921241</ArticleId><ArticleId IdType="pii">13-010</ArticleId><ArticleId IdType="doi">10.3852/13-010</ArticleId></ArticleIdList></PubmedData></pubmed><affiliations><list><country><li>États-Unis</li></country><region><li>Tennessee</li></region></list><tree><noCountry><name sortKey="Lamour, Kurt" sort="Lamour, Kurt" uniqKey="Lamour K" first="Kurt" last="Lamour">Kurt Lamour</name><name sortKey="Zhou, Yuxin" sort="Zhou, Yuxin" uniqKey="Zhou Y" first="Yuxin" last="Zhou">Yuxin Zhou</name></noCountry><country name="États-Unis"><region name="Tennessee"><name sortKey="Shrestha, Sandesh K" sort="Shrestha, Sandesh K" uniqKey="Shrestha S" first="Sandesh K" last="Shrestha">Sandesh K. 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